Research Catalog

Title

Gene function analysis / edited by Michael F. Ochs.

Publication

Totowa, N.J. : Humana, [2007], ©2007.

Items in the Library & Off-site

Details

Additional Authors

Ochs, Michael F.

Description

xiv, 337 pages : illustrations; 24 cm.

Series Statement

Methods in molecular biology ; 408

Uniform Title

Methods in molecular biology ; v. 408.

Subjects

• Genetics
• Laboratory Manual
• Sequence Analysis, DNA
• Genome
• Databases, Genetic
• Genomics > methods
• Computational Biology > methods
• Genetic Techniques
• Genetics > Technique

Genre/Form

Laboratory Manual.

Bibliography (note)

• Includes bibliographical references and index.

Contents

Part I. Computational Methods I -- 1. Gene Function Inference From Gene Expression of Deletion Mutants / Ghislain Bidaut -- 2. Association Analysis for Large-Scale Gene Set Data / Stefan A. Kirov, Bing Zhang and Jay R. Snoddy -- 3. Estimating Gene Function With Least Squares Nonnegative Matrix Factorization / Guoli Wang and Michael F. Ochs -- 4. From Promoter Analysis to Transcriptional Regulatory Network Prediction Using PAINT / Gregory E. Gonye, Praveen Chakravarthula, James S. Schwaber and Rajanikanth Vadigepalli -- 5. Prediction of Intrinsic Disorder and Its Use in Functional Proteomics / Vladimir N. Uversky, Predrag Radivojac, Lilia M. Iakoucheva, Zoran Obradovic and A. Keith Dunker -- Part II. Computational Methods II -- 6. Sybil: Methods and Software for Multiple Genome Comparison and Visualization / Jonathan Crabtree, Samuel V. Angiuoli, Jennifer R. Wortman and Owen R. White -- 7. Estimating Protein Function Using Protein-Protein Relationships / Shailesh V. Date -- 8. Bioinformatics Tools for Modeling Transcription Factor Target Genes and Epigenetic Changes / Ramana V. Davuluri -- 9. Mining Biomedical Data Using MetaMap Transfer (MMTx) and the Unified Medical Language System (UMLS) / John D. Osborne, Simon Lin, Lihua (Julie) Zhu, and Warren A. Kibbe -- 10. Statistical Methods for Identifying Differentially Expressed Gene Combinations / Yen-Yi Ho, Leslie Cope, Marcel Dettling and Giovanni Parmigiani -- Part III. Experimental Methods -- 11. Gene Function Analysis Using the Chicken B-Cell Line DT40 / Randolph B. Caldwell, Petra Fiedler, Ulrike Schoetz and Jean-Marie Buerstedde -- 12. Design and Application of a shRNA-Based Gene Replacement Retrovirus / Rugang Zhang, Peter D. Adams and Xiaofen Ye -- 13. Construction of Simple and Efficient DNA Vector-Based Short Hairpin RNA Expression Systems for Specific Gene Silencing in Mammalian Cells / Tsung-Lin Cheng and Wen-Tsan Chang -- 14. Selection of Recombinant Antibodies From Antibody Gene Libraries / Michael Hust, Stefan Dubel and Thomas Schirrmann -- 15. A Bacterial/Yeast Merged Two-Hybrid System: Protocol for Yeast Screening With Single or Parallel Baits / Nadezhda Y. Tikhmyanova, Eugene A. Izumchenko, Ilya G. Serebriiskii and Erica A. Golemis -- 16. A Bacterial/Yeast Merged Two-Hybrid System: Protocol for Bacterial Screening / Ilya G. Serebriiskii, Nadia Milech and Erica A. Golemis -- 17. Engineering Cys2His2 Zinc Finger Domains Using a Bacterial Cell-Based Two-Hybrid Selection System / Stacey Thibodeau-Beganny and J. Keith Joung.

ISBN

• 9781588297341 (hbk.)
• 1588297349 (hbk.)
• 9781597455473 (e-book)
• 1597455474 (e-book)

OCLC

• ocn145389219
• 145389219
• SCSB-5360186

Owning Institutions

Columbia University Libraries